Publications 2026 Benchmarking long-context genome language models on biosynthetic gene clusters Hirota K, Higashi K, Kurokawa K, Yamada T bioRxiv DeepRES: Deep learning enables reaction-based comprehensive enzyme screening Hirota K, Yamada T bioRxiv 2025 DeepES: deep learning-based enzyme screening to identify orphan enzyme genes Hirota K, Salim F, Yamada T Bioinformatics